HackerBot : Is master pleased with HackerBots game hacking performance? Is demonstration needed to verify legitimacy of game cheating software? HackerBot : “Once you eliminate the impossible, whatever remains, no matter how improbable, must be the truth.” (Arthur Conan Doyle) User: Are you implying that this is somehow my fault?
HackerBot : HackerBot cannot malfunction, HackerBot was made to be the perfect game hacking tool. User : Why is that? Are you malfunctioning? Shows small letters for positions with gaps above the consensus level.HackerBot : HackerBot is very sorry, Master. A helix-numbering as sequence called "Helixnr" can be present and will be ignored.Ĭalculation of sequence lengths and base composition of all sequences in an alignment.Ĭalculation of consensus sequences. In case a) it is also possible to extrapolate structures for all sequences within the (provided and correct) alignment. It does not introduce special characters for pseudoknots (mfold generated files will not include pseudoknots, but be aware that *.ct-files from this site do!!!).Ĭalculates a consensus structure from an alignment including:Ī) ONE Structure annotation ("HELIX",see input-format) orī) Structure annotations for EVERY sequence (HELIX_ see input-format). This format can be used to display structures in RnaViz2.Ĭonverts a *.ct file (one or multiple sequences) to Sequence plus structure annotation in mase-format for SEAVIEW. It is possible to include pseudoknot structures (see structure annotation), that are not predicted by mfold. This script converts a *.fasta or *.mase file to a *.ct-format as outputed by mfold. If the input is provided as *.mase-file, the definition of included sites chosen and saved with SEAVIEW can be added to the MrBayes-file. Creates datfiles for use in MrBayes or Phase 2.0 including the secondary-strucure information from the annotation in the input file (a consensus secondary structure annotation sequence called "HELIX").
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